Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AL844908.2-201ENST00000609461 460 ntBASIC27.81■■■□□ 2.04
RIMBP3Q9UFD9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 EP400NL-214ENST00000641289 2402 ntBASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC27.8■■■□□ 2.04
RIMBP3Q9UFD9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 AC009407.1-201ENST00000568958 598 ntBASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 AP000842.3-202ENST00000569238 1080 ntBASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 AC008494.3-201ENST00000606615 944 ntBASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 AL139099.5-201ENST00000635274 300 ntBASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 PWWP2AP1-201ENST00000429776 2273 ntBASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RIMBP3Q9UFD9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 AC011495.1-201ENST00000498085 584 ntBASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 MFF-223ENST00000524634 647 ntTSL 2 BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC27.78■■■□□ 2.04
RIMBP3Q9UFD9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 ACTG1P4-201ENST00000425123 1122 ntBASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 DFFBP1-201ENST00000433250 979 ntBASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 GOLGA2P4-201ENST00000441462 777 ntBASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 AC107918.2-201ENST00000530817 355 ntBASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
RIMBP3Q9UFD9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
RIMBP3Q9UFD9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RIMBP3Q9UFD9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RIMBP3Q9UFD9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RIMBP3Q9UFD9 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC27.75■■■□□ 2.03
RIMBP3Q9UFD9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
RIMBP3Q9UFD9 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC27.75■■■□□ 2.03
RIMBP3Q9UFD9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC27.75■■■□□ 2.03
RIMBP3Q9UFD9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC27.75■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms