Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.01■□□□□ 0.95
CLIP2Q9UDT6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.01■□□□□ 0.95
CLIP2Q9UDT6 AL121912.1-201ENST00000603683 238 ntBASIC21.01■□□□□ 0.95
CLIP2Q9UDT6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CLIP2Q9UDT6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CLIP2Q9UDT6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.01■□□□□ 0.95
CLIP2Q9UDT6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CLIP2Q9UDT6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
CLIP2Q9UDT6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLIP2Q9UDT6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLIP2Q9UDT6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.01■□□□□ 0.95
CLIP2Q9UDT6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.01■□□□□ 0.95
CLIP2Q9UDT6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21■□□□□ 0.95
CLIP2Q9UDT6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLIP2Q9UDT6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLIP2Q9UDT6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CLIP2Q9UDT6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CLIP2Q9UDT6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21■□□□□ 0.95
CLIP2Q9UDT6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLIP2Q9UDT6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CLIP2Q9UDT6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
CLIP2Q9UDT6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21■□□□□ 0.95
CLIP2Q9UDT6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CLIP2Q9UDT6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLIP2Q9UDT6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21■□□□□ 0.95
CLIP2Q9UDT6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21■□□□□ 0.95
CLIP2Q9UDT6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21■□□□□ 0.95
CLIP2Q9UDT6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLIP2Q9UDT6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLIP2Q9UDT6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 AC135776.1-201ENST00000319817 2481 ntBASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 AL096828.2-201ENST00000567259 1965 ntBASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIP2Q9UDT6 AC093677.2-201ENST00000600169 1863 ntBASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 AC011467.2-201ENST00000598425 242 ntBASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 INTS4P1-201ENST00000438455 1935 ntBASIC20.98■□□□□ 0.95
CLIP2Q9UDT6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms