Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 FAM215A-202ENST00000632077 792 ntBASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HDAC6Q9UBN7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC6Q9UBN7 AC139713.2-201ENST00000641328 2723 ntBASIC20.02■□□□□ 0.79
HDAC6Q9UBN7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
HDAC6Q9UBN7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
HDAC6Q9UBN7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HDAC6Q9UBN7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HDAC6Q9UBN7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.02■□□□□ 0.79
HDAC6Q9UBN7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 KRT18P65-201ENST00000439811 1286 ntBASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 SCARNA2-201ENST00000458748 420 ntBASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 AC106730.1-201ENST00000566722 1090 ntBASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 AC139887.3-201ENST00000568585 713 ntBASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 AC117500.6-201ENST00000624871 588 ntBASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 ESPNP-201ENST00000270691 2015 ntBASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.01■□□□□ 0.79
HDAC6Q9UBN7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms