Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPF1Q9NWY4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPF1Q9NWY4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPF1Q9NWY4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HPF1Q9NWY4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HPF1Q9NWY4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HPF1Q9NWY4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HPF1Q9NWY4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HPF1Q9NWY4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HPF1Q9NWY4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HPF1Q9NWY4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 AC135776.1-201ENST00000319817 2481 ntBASIC16.45■□□□□ 0.22
HPF1Q9NWY4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 AL138831.2-201ENST00000606564 490 ntBASIC16.45■□□□□ 0.22
HPF1Q9NWY4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 AC125634.1-201ENST00000438758 1403 ntBASIC16.45■□□□□ 0.22
HPF1Q9NWY4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.45■□□□□ 0.22
HPF1Q9NWY4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 EMBP1-201ENST00000458200 901 ntBASIC16.44■□□□□ 0.22
HPF1Q9NWY4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 DUTP2-201ENST00000519164 463 ntBASIC16.44■□□□□ 0.22
HPF1Q9NWY4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 MIR5100-201ENST00000579544 119 ntBASIC16.44■□□□□ 0.22
HPF1Q9NWY4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.44■□□□□ 0.22
HPF1Q9NWY4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.44■□□□□ 0.22
HPF1Q9NWY4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HPF1Q9NWY4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms