Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 AC098818.2-201ENST00000564925 2320 ntBASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 AC002310.6-201ENST00000624451 1377 ntBASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 AL020996.1-203ENST00000536896 2307 ntBASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 MIR4469-201ENST00000583919 79 ntBASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 AC097637.2-201ENST00000624096 1997 ntBASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1R1Q9NWW0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 BX276092.7-203ENST00000637198 1536 ntBASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 IGLL3P-201ENST00000412472 434 ntBASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 AP006288.1-201ENST00000446065 395 ntBASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 AC116407.2-201ENST00000613639 860 ntBASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1R1Q9NWW0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HCFC1R1Q9NWW0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
HCFC1R1Q9NWW0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.29■□□□□ 0.52
HCFC1R1Q9NWW0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC1R1Q9NWW0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC1R1Q9NWW0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC1R1Q9NWW0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC1R1Q9NWW0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
HCFC1R1Q9NWW0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC1R1Q9NWW0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC1R1Q9NWW0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HCFC1R1Q9NWW0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
HCFC1R1Q9NWW0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.29■□□□□ 0.52
HCFC1R1Q9NWW0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms