Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 MTND1P1-201ENST00000445453 368 ntBASIC20.61■□□□□ 0.89
RNF216Q9NWF9 KRT18P38-201ENST00000449496 1282 ntBASIC20.61■□□□□ 0.89
RNF216Q9NWF9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 C15orf40-209ENST00000538348 561 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 NOP10-202ENST00000557912 436 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 AC140725.3-201ENST00000616193 880 ntBASIC20.61■□□□□ 0.89
RNF216Q9NWF9 AC005393.1-201ENST00000617916 584 ntBASIC20.61■□□□□ 0.89
RNF216Q9NWF9 AC093458.2-201ENST00000623150 629 ntBASIC20.61■□□□□ 0.89
RNF216Q9NWF9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF216Q9NWF9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 AC008543.2-201ENST00000436907 1383 ntBASIC20.6■□□□□ 0.89
RNF216Q9NWF9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 AP006222.1-201ENST00000442116 1292 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 MTND1P5-201ENST00000517906 940 ntBASIC20.6■□□□□ 0.89
RNF216Q9NWF9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 AC009088.1-201ENST00000565152 833 ntBASIC20.6■□□□□ 0.89
RNF216Q9NWF9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.6■□□□□ 0.89
RNF216Q9NWF9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 CR769767.2-201ENST00000622735 460 ntBASIC20.6■□□□□ 0.89
RNF216Q9NWF9 CASC19-208ENST00000641056 1292 ntBASIC20.6■□□□□ 0.89
RNF216Q9NWF9 CASC19-227ENST00000641411 1285 ntBASIC20.6■□□□□ 0.89
RNF216Q9NWF9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 CDY3P-201ENST00000454543 1618 ntBASIC20.6■□□□□ 0.89
RNF216Q9NWF9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF216Q9NWF9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 LMO3-224ENST00000540848 1574 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 AL589826.1-201ENST00000340697 249 ntBASIC20.59■□□□□ 0.89
RNF216Q9NWF9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.59■□□□□ 0.89
RNF216Q9NWF9 LINC02251-201ENST00000554798 1224 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF216Q9NWF9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms