Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 HNRNPDP1-201ENST00000439535 754 ntBASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 AC073592.3-201ENST00000625118 1834 ntBASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 FEM1AP3-201ENST00000403722 1741 ntBASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ARHGEF3Q9NR81 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 RCN1P2-201ENST00000398357 915 ntBASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 MTDHP3-201ENST00000594186 672 ntBASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 PCDHA12-202ENST00000613593 2588 ntBASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
ARHGEF3Q9NR81 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 AC141586.5-201ENST00000624546 2050 ntBASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 PGAM5P1-201ENST00000518923 814 ntBASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF3Q9NR81 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms