Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NLRC4Q9NPP4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NLRC4Q9NPP4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NLRC4Q9NPP4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NLRC4Q9NPP4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 TSPY12P-201ENST00000421279 868 ntBASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 KRT18P38-201ENST00000449496 1282 ntBASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 PRORSD1P-202ENST00000563365 2154 ntBASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NLRC4Q9NPP4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 AC022211.2-201ENST00000585075 2527 ntBASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 FAM8A6P-201ENST00000407496 1135 ntBASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 AC009154.2-201ENST00000621177 724 ntBASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.22■□□□□ 0.67
NLRC4Q9NPP4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 DDX43P3-201ENST00000441064 443 ntBASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 AP003733.1-201ENST00000491725 852 ntBASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NLRC4Q9NPP4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms