Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 AC099343.3-201ENST00000605834 2503 ntBASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 NORAD-201ENST00000565493 5339 ntBASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 AL023284.2-201ENST00000405850 579 ntBASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 AC133681.1-201ENST00000465482 601 ntBASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 RNA5SP413-201ENST00000516373 109 ntBASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 AC104771.1-201ENST00000603335 964 ntBASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 AC008622.2-201ENST00000617006 1229 ntBASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 AC133963.1-201ENST00000504166 1679 ntBASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
SND1-IT1Q9HBX3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 MIR600HG-201ENST00000449175 5984 ntBASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 AL353807.1-201ENST00000427475 662 ntBASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 AC008040.2-201ENST00000461049 708 ntBASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 AC130371.2-201ENST00000619443 611 ntBASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 CR392000.1-201ENST00000624770 1228 ntBASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 TSPY26P-202ENST00000565928 3884 ntBASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms