Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
BRF2Q9HAW0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.96■□□□□ 0.3
BRF2Q9HAW0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.96■□□□□ 0.3
BRF2Q9HAW0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
BRF2Q9HAW0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
BRF2Q9HAW0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
BRF2Q9HAW0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
BRF2Q9HAW0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
BRF2Q9HAW0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 RN7SL606P-201ENST00000472779 293 ntBASIC16.95■□□□□ 0.3
BRF2Q9HAW0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 AC090616.6-201ENST00000582640 721 ntBASIC16.95■□□□□ 0.3
BRF2Q9HAW0 AL353801.3-201ENST00000609898 542 ntBASIC16.95■□□□□ 0.3
BRF2Q9HAW0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRF2Q9HAW0 CROCCP2-202ENST00000412962 2773 ntBASIC16.94■□□□□ 0.3
BRF2Q9HAW0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 COX5BP2-201ENST00000392354 334 ntBASIC16.94■□□□□ 0.3
BRF2Q9HAW0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 AC011498.5-201ENST00000592027 486 ntBASIC16.94■□□□□ 0.3
BRF2Q9HAW0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 LTB4R2-202ENST00000528054 3092 ntBASIC16.94■□□□□ 0.3
BRF2Q9HAW0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRF2Q9HAW0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 AC002558.1-201ENST00000488906 803 ntBASIC16.93■□□□□ 0.3
BRF2Q9HAW0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 AL121956.5-201ENST00000625261 221 ntBASIC16.93■□□□□ 0.3
BRF2Q9HAW0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 AC016396.2-201ENST00000562575 1417 ntBASIC16.93■□□□□ 0.3
BRF2Q9HAW0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
BRF2Q9HAW0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms