Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
UPF2Q9HAU5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 ID1-201ENST00000376105 1233 ntBASIC21.78■■□□□ 1.08
UPF2Q9HAU5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 SLC25A1P2-201ENST00000430693 912 ntBASIC21.78■■□□□ 1.08
UPF2Q9HAU5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 AC010240.3-201ENST00000607688 395 ntBASIC21.78■■□□□ 1.08
UPF2Q9HAU5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.78■■□□□ 1.08
UPF2Q9HAU5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 AL353719.1-201ENST00000566847 864 ntBASIC21.77■■□□□ 1.08
UPF2Q9HAU5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 AP005242.2-201ENST00000580065 1175 ntBASIC21.77■■□□□ 1.08
UPF2Q9HAU5 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
UPF2Q9HAU5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
UPF2Q9HAU5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
UPF2Q9HAU5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UPF2Q9HAU5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms