Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 AL035633.1-201ENST00000406139 838 ntBASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 AC134043.2-201ENST00000624206 2238 ntBASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
SCAF1Q9H7N4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 MED15P5-201ENST00000423150 992 ntBASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 FAM8A3P-201ENST00000427218 844 ntBASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 AC048344.4-201ENST00000619744 527 ntBASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 NKILA-202ENST00000614771 2598 ntBASIC26.42■■□□□ 1.82
SCAF1Q9H7N4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 HNRNPA1P23-201ENST00000491091 1133 ntBASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCAF1Q9H7N4 AC108860.2-201ENST00000562760 2183 ntBASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 AC027601.4-201ENST00000611259 610 ntBASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SCAF1Q9H7N4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms