Protein–RNA interactions for Protein: Q9H7E2

TDRD3, Tudor domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3Q9H7E2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.91■□□□□ 0.94
TDRD3Q9H7E2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TDRD3Q9H7E2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.91■□□□□ 0.94
TDRD3Q9H7E2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.91■□□□□ 0.94
TDRD3Q9H7E2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TDRD3Q9H7E2 AC116407.2-201ENST00000613639 860 ntBASIC20.91■□□□□ 0.94
TDRD3Q9H7E2 AL805961.1-202ENST00000641562 540 ntBASIC20.91■□□□□ 0.94
TDRD3Q9H7E2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TDRD3Q9H7E2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.91■□□□□ 0.94
TDRD3Q9H7E2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TDRD3Q9H7E2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TDRD3Q9H7E2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
TDRD3Q9H7E2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TDRD3Q9H7E2 AC009336.1-201ENST00000608941 1553 ntBASIC20.89■□□□□ 0.94
TDRD3Q9H7E2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TDRD3Q9H7E2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TDRD3Q9H7E2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.89■□□□□ 0.94
TDRD3Q9H7E2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 MRPL20P1-201ENST00000400819 433 ntBASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 AC254562.1-201ENST00000417586 456 ntBASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 IGHV3-52-201ENST00000519770 353 ntBASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 AC004877.2-201ENST00000623941 599 ntBASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TDRD3Q9H7E2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 LINC00982-205ENST00000420957 435 ntBASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 DDX43P3-201ENST00000441064 443 ntBASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 OR7E47P-204ENST00000575924 449 ntBASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 REXO1L9P-201ENST00000604264 2108 ntBASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 LINC02084-201ENST00000606069 1096 ntBASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 AL353135.1-201ENST00000606729 504 ntBASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 AC010654.1-201ENST00000615722 808 ntBASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 AC010507.1-201ENST00000633895 436 ntBASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
TDRD3Q9H7E2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TDRD3Q9H7E2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TDRD3Q9H7E2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TDRD3Q9H7E2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TDRD3Q9H7E2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TDRD3Q9H7E2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TDRD3Q9H7E2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms