Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 Z83851.2-201ENST00000609564 659 ntBASIC20.61■□□□□ 0.89
SH2D4AQ9H788 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 MIR1199-201ENST00000621445 119 ntBASIC20.61■□□□□ 0.89
SH2D4AQ9H788 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 BX276092.7-203ENST00000637198 1536 ntBASIC20.61■□□□□ 0.89
SH2D4AQ9H788 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SH2D4AQ9H788 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.6■□□□□ 0.89
SH2D4AQ9H788 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 SIRPAP1-201ENST00000448467 1770 ntBASIC20.6■□□□□ 0.89
SH2D4AQ9H788 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 AC003669.1-201ENST00000334569 611 ntBASIC20.6■□□□□ 0.89
SH2D4AQ9H788 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 KRT18P13-201ENST00000400056 1290 ntBASIC20.6■□□□□ 0.89
SH2D4AQ9H788 AL591424.1-201ENST00000442569 1213 ntBASIC20.6■□□□□ 0.89
SH2D4AQ9H788 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 POLD2P1-201ENST00000511220 997 ntBASIC20.6■□□□□ 0.89
SH2D4AQ9H788 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 AC027601.4-201ENST00000611259 610 ntBASIC20.6■□□□□ 0.89
SH2D4AQ9H788 PGM5P2-202ENST00000637225 1043 ntBASIC20.6■□□□□ 0.89
SH2D4AQ9H788 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
SH2D4AQ9H788 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 AL049757.1-201ENST00000616842 1596 ntBASIC20.59■□□□□ 0.89
SH2D4AQ9H788 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 KLF4P1-201ENST00000412782 1185 ntBASIC20.59■□□□□ 0.89
SH2D4AQ9H788 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 RNA5SP415-201ENST00000517246 115 ntBASIC20.59■□□□□ 0.89
SH2D4AQ9H788 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.59■□□□□ 0.89
SH2D4AQ9H788 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 AL589182.2-201ENST00000619332 1049 ntBASIC20.59■□□□□ 0.89
SH2D4AQ9H788 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.59■□□□□ 0.89
SH2D4AQ9H788 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 AP002414.3-201ENST00000589352 1468 ntBASIC20.58■□□□□ 0.89
SH2D4AQ9H788 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SH2D4AQ9H788 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms