Protein–RNA interactions for Protein: Q9GZU7

CTDSP1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1Q9GZU7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CTDSP1Q9GZU7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 AC091305.1-201ENST00000479476 895 ntBASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CTDSP1Q9GZU7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTDSP1Q9GZU7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTDSP1Q9GZU7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.66□□□□□ -0.22
CTDSP1Q9GZU7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTDSP1Q9GZU7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CTDSP1Q9GZU7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTDSP1Q9GZU7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTDSP1Q9GZU7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTDSP1Q9GZU7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
CTDSP1Q9GZU7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CTDSP1Q9GZU7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CTDSP1Q9GZU7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CTDSP1Q9GZU7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CTDSP1Q9GZU7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms