Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 AL121894.2-201ENST00000602977 491 ntBASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.32■□□□□ 0.52
FOXP3Q9BZS1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 AC112907.2-201ENST00000448639 330 ntBASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 VENTXP5-201ENST00000523979 775 ntBASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 GCSHP2-201ENST00000560971 527 ntBASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXP3Q9BZS1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 AP000523.1-201ENST00000398242 1049 ntBASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 LINC00167-201ENST00000530583 1419 ntBASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXP3Q9BZS1 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms