Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 AL157888.1-201ENST00000631930 593 ntBASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.12□□□□□ -0.15
CHRDL1Q9BU40 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 AC124067.4-201ENST00000519691 2379 ntBASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 LIN28AP1-201ENST00000429574 405 ntBASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 ATP5G1P1-201ENST00000448724 379 ntBASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 GCSHP2-201ENST00000560971 527 ntBASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 AC012306.2-201ENST00000609350 630 ntBASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 AL023973.1-201ENST00000624619 620 ntBASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.11□□□□□ -0.15
CHRDL1Q9BU40 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CHRDL1Q9BU40 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms