Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 GPR32P1-201ENST00000601788 811 ntBASIC18.36■□□□□ 0.53
HERPUD2Q9BSE4 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.36■□□□□ 0.53
HERPUD2Q9BSE4 AC083849.1-201ENST00000615227 514 ntBASIC18.36■□□□□ 0.53
HERPUD2Q9BSE4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.36■□□□□ 0.53
HERPUD2Q9BSE4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.36■□□□□ 0.53
HERPUD2Q9BSE4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HERPUD2Q9BSE4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.36■□□□□ 0.53
HERPUD2Q9BSE4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERPUD2Q9BSE4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HERPUD2Q9BSE4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 ZNF444P1-201ENST00000559497 298 ntBASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HERPUD2Q9BSE4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 AC010460.3-201ENST00000511359 1579 ntBASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.34■□□□□ 0.53
HERPUD2Q9BSE4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERPUD2Q9BSE4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERPUD2Q9BSE4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HERPUD2Q9BSE4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
HERPUD2Q9BSE4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
HERPUD2Q9BSE4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERPUD2Q9BSE4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
HERPUD2Q9BSE4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HERPUD2Q9BSE4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERPUD2Q9BSE4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERPUD2Q9BSE4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERPUD2Q9BSE4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HERPUD2Q9BSE4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HERPUD2Q9BSE4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms