Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ABCA3Q99758 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
ABCA3Q99758 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC23.36■■□□□ 1.33
ABCA3Q99758 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
ABCA3Q99758 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ABCA3Q99758 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCA3Q99758 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ABCA3Q99758 AL158211.3-201ENST00000607385 239 ntBASIC23.36■■□□□ 1.33
ABCA3Q99758 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCA3Q99758 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ABCA3Q99758 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.36■■□□□ 1.33
ABCA3Q99758 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCA3Q99758 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.36■■□□□ 1.33
ABCA3Q99758 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCA3Q99758 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC23.36■■□□□ 1.33
ABCA3Q99758 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCA3Q99758 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCA3Q99758 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCA3Q99758 FO538757.1-201ENST00000623083 1397 ntBASIC23.36■■□□□ 1.33
ABCA3Q99758 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ABCA3Q99758 MRPS18AP1-201ENST00000414458 589 ntBASIC23.36■■□□□ 1.33
ABCA3Q99758 AC092580.3-201ENST00000430932 139 ntBASIC23.36■■□□□ 1.33
ABCA3Q99758 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
ABCA3Q99758 GATB-205ENST00000508611 605 ntTSL 2 BASIC23.36■■□□□ 1.33
ABCA3Q99758 AP005018.1-201ENST00000525475 301 ntBASIC23.36■■□□□ 1.33
ABCA3Q99758 RARRES2P8-201ENST00000566335 367 ntBASIC23.36■■□□□ 1.33
ABCA3Q99758 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC23.36■■□□□ 1.33
ABCA3Q99758 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC23.36■■□□□ 1.33
ABCA3Q99758 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC23.36■■□□□ 1.33
ABCA3Q99758 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ABCA3Q99758 AL031598.1-201ENST00000561511 1773 ntBASIC23.36■■□□□ 1.33
ABCA3Q99758 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ABCA3Q99758 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
ABCA3Q99758 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC23.35■■□□□ 1.33
ABCA3Q99758 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
ABCA3Q99758 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ABCA3Q99758 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ABCA3Q99758 GRAP-202ENST00000395635 834 ntTSL 2 BASIC23.35■■□□□ 1.33
ABCA3Q99758 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC23.35■■□□□ 1.33
ABCA3Q99758 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC23.35■■□□□ 1.33
ABCA3Q99758 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ABCA3Q99758 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ABCA3Q99758 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ABCA3Q99758 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ABCA3Q99758 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ABCA3Q99758 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ABCA3Q99758 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
ABCA3Q99758 HNRNPFP1-201ENST00000391730 1133 ntBASIC23.34■■□□□ 1.33
ABCA3Q99758 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ABCA3Q99758 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ABCA3Q99758 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC23.34■■□□□ 1.33
ABCA3Q99758 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC23.34■■□□□ 1.33
ABCA3Q99758 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
ABCA3Q99758 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
ABCA3Q99758 PI4KAP1-204ENST00000612579 1703 ntBASIC23.34■■□□□ 1.33
ABCA3Q99758 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ABCA3Q99758 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
ABCA3Q99758 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.34■■□□□ 1.33
ABCA3Q99758 FLYWCH1P1-201ENST00000460917 1874 ntBASIC23.34■■□□□ 1.33
ABCA3Q99758 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ABCA3Q99758 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ABCA3Q99758 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
ABCA3Q99758 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
ABCA3Q99758 AC002056.1-201ENST00000395613 760 ntBASIC23.33■■□□□ 1.33
ABCA3Q99758 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC23.33■■□□□ 1.33
ABCA3Q99758 IGHV3-52-201ENST00000519770 353 ntBASIC23.33■■□□□ 1.33
ABCA3Q99758 AL512356.2-201ENST00000546955 174 ntBASIC23.33■■□□□ 1.33
ABCA3Q99758 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC23.33■■□□□ 1.33
ABCA3Q99758 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
ABCA3Q99758 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ABCA3Q99758 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ABCA3Q99758 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
ABCA3Q99758 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.33■■□□□ 1.33
ABCA3Q99758 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ABCA3Q99758 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
ABCA3Q99758 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ABCA3Q99758 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
ABCA3Q99758 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ABCA3Q99758 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
ABCA3Q99758 RPL30-202ENST00000396070 440 ntTSL 2 BASIC23.33■■□□□ 1.32
ABCA3Q99758 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC23.33■■□□□ 1.32
ABCA3Q99758 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
ABCA3Q99758 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC23.33■■□□□ 1.32
ABCA3Q99758 LINC02560-201ENST00000596379 459 ntBASIC23.33■■□□□ 1.32
ABCA3Q99758 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC23.33■■□□□ 1.32
ABCA3Q99758 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
ABCA3Q99758 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ABCA3Q99758 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ABCA3Q99758 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
ABCA3Q99758 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ABCA3Q99758 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC23.32■■□□□ 1.32
ABCA3Q99758 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ABCA3Q99758 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ABCA3Q99758 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ABCA3Q99758 TUBB3P1-201ENST00000405796 1332 ntBASIC23.32■■□□□ 1.32
ABCA3Q99758 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC23.32■■□□□ 1.32
ABCA3Q99758 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
ABCA3Q99758 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC23.32■■□□□ 1.32
ABCA3Q99758 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
ABCA3Q99758 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms