Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 AC135050.7-201ENST00000624508 2218 ntBASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 MYCLP1-201ENST00000372451 1075 ntBASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 MRPL20P1-201ENST00000400819 433 ntBASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 AC010507.1-201ENST00000633895 436 ntBASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK5RAP2Q96SN8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 UPF3AP3-201ENST00000420996 769 ntBASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 ADH5P3-201ENST00000433842 1137 ntBASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 AC064836.3-201ENST00000607928 673 ntBASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK5RAP2Q96SN8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 AC002347.1-201ENST00000569543 541 ntBASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 AC097637.2-201ENST00000624096 1997 ntBASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 MIR1233-2-201ENST00000408138 82 ntBASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 MIR1233-1-201ENST00000408722 82 ntBASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 GPALPP1-207ENST00000611650 899 ntBASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CDK5RAP2Q96SN8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 LYSMD4-203ENST00000378904 2122 ntBASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK5RAP2Q96SN8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDK5RAP2Q96SN8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms