Protein–RNA interactions for Protein: Q96QF7

GCNA, Acidic repeat-containing protein, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNAQ96QF7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCNAQ96QF7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
GCNAQ96QF7 IL9RP2-201ENST00000423948 1312 ntBASIC18.69■□□□□ 0.58
GCNAQ96QF7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCNAQ96QF7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.69■□□□□ 0.58
GCNAQ96QF7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
GCNAQ96QF7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GCNAQ96QF7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GCNAQ96QF7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 AC018712.1-201ENST00000455767 687 ntBASIC18.68■□□□□ 0.58
GCNAQ96QF7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 AC132938.6-201ENST00000623828 1655 ntBASIC18.68■□□□□ 0.58
GCNAQ96QF7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GCNAQ96QF7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.68■□□□□ 0.58
GCNAQ96QF7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.67■□□□□ 0.58
GCNAQ96QF7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.67■□□□□ 0.58
GCNAQ96QF7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.67■□□□□ 0.58
GCNAQ96QF7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
GCNAQ96QF7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.67■□□□□ 0.58
GCNAQ96QF7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.67■□□□□ 0.58
GCNAQ96QF7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
GCNAQ96QF7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.67■□□□□ 0.58
GCNAQ96QF7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.67■□□□□ 0.58
GCNAQ96QF7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GCNAQ96QF7 RNA5SP419-201ENST00000515908 135 ntBASIC18.67■□□□□ 0.58
GCNAQ96QF7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.67■□□□□ 0.58
GCNAQ96QF7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.67■□□□□ 0.58
GCNAQ96QF7 AC148477.8-201ENST00000624298 468 ntBASIC18.67■□□□□ 0.58
GCNAQ96QF7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.67■□□□□ 0.58
GCNAQ96QF7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 AP000997.3-201ENST00000623333 2250 ntBASIC18.67■□□□□ 0.58
GCNAQ96QF7 AC073592.3-201ENST00000625118 1834 ntBASIC18.67■□□□□ 0.58
GCNAQ96QF7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.67■□□□□ 0.58
GCNAQ96QF7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GCNAQ96QF7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
GCNAQ96QF7 AL356309.3-201ENST00000624132 1934 ntBASIC18.66■□□□□ 0.58
GCNAQ96QF7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 AC135050.7-201ENST00000624508 2218 ntBASIC18.66■□□□□ 0.58
GCNAQ96QF7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.66■□□□□ 0.58
GCNAQ96QF7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GCNAQ96QF7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms