Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
RAB3IPQ96QF0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 SDHAP2-201ENST00000455183 2001 ntBASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 KRT8P50-201ENST00000562022 1438 ntBASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 AC092068.3-201ENST00000587894 2016 ntBASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 AC009102.3-201ENST00000623118 1491 ntBASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB3IPQ96QF0 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 AC105917.1-201ENST00000506637 2539 ntBASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 AC005052.1-201ENST00000625181 2492 ntBASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 AC004911.1-201ENST00000416316 871 ntBASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 AC231657.2-201ENST00000624556 255 ntBASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB3IPQ96QF0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 AC080038.1-201ENST00000611274 1154 ntBASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB3IPQ96QF0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms