Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 TPSP2-201ENST00000561760 610 ntBASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 AP002414.4-201ENST00000589764 1148 ntBASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 AC091076.1-201ENST00000610741 619 ntBASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CSPG4P5Q96PW8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.27■□□□□ 0.51
CSPG4P5Q96PW8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CSPG4P5Q96PW8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 AC141586.5-201ENST00000624546 2050 ntBASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 AC233702.3-201ENST00000578656 1387 ntBASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.26■□□□□ 0.51
CSPG4P5Q96PW8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 VENTXP7-201ENST00000475503 772 ntBASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 AL645608.8-201ENST00000606034 2086 ntBASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CSPG4P5Q96PW8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 MIR3180-1-201ENST00000580374 94 ntBASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 MIR3180-3-201ENST00000584616 94 ntBASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 AC069148.1-201ENST00000608741 768 ntBASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 NPAP1P7-201ENST00000613027 823 ntBASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSPG4P5Q96PW8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms