Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MS4A4EQ96PG1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MS4A4EQ96PG1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MS4A4EQ96PG1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MS4A4EQ96PG1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MS4A4EQ96PG1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MS4A4EQ96PG1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MS4A4EQ96PG1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
MS4A4EQ96PG1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
MS4A4EQ96PG1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
MS4A4EQ96PG1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 AC005332.1-201ENST00000577698 1310 ntBASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 RN7SL606P-201ENST00000472779 293 ntBASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MS4A4EQ96PG1 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 AC005104.2-201ENST00000427818 678 ntBASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 AC087388.1-201ENST00000571370 1112 ntBASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 IGHV3-41-201ENST00000613121 348 ntBASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 AC124864.1-201ENST00000623408 392 ntBASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 PKD1P1-201ENST00000458669 6805 ntBASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MS4A4EQ96PG1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 AC097374.2-201ENST00000618617 1306 ntBASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 AL121672.3-201ENST00000608644 468 ntBASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 AL353801.3-201ENST00000609898 542 ntBASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MS4A4EQ96PG1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.52■□□□□ 0.23
MS4A4EQ96PG1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms