Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 AP000550.4-202ENST00000639755 178 ntBASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
COX4I2Q96KJ9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.52■□□□□ 0.23
COX4I2Q96KJ9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.52■□□□□ 0.23
COX4I2Q96KJ9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
COX4I2Q96KJ9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
COX4I2Q96KJ9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.52■□□□□ 0.23
COX4I2Q96KJ9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.52■□□□□ 0.23
COX4I2Q96KJ9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COX4I2Q96KJ9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COX4I2Q96KJ9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.52■□□□□ 0.23
COX4I2Q96KJ9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
COX4I2Q96KJ9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
COX4I2Q96KJ9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COX4I2Q96KJ9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 AL031133.1-201ENST00000406807 723 ntBASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 AC117947.1-201ENST00000427448 529 ntBASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.51■□□□□ 0.23
COX4I2Q96KJ9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 AL445675.2-201ENST00000620291 557 ntBASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 AC083906.6-201ENST00000641366 219 ntBASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
COX4I2Q96KJ9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms