Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 AC025678.2-201ENST00000562061 970 ntBASIC14.97□□□□□ -0.01
SPG11Q96JI7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPG11Q96JI7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPG11Q96JI7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPG11Q96JI7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 AC096734.2-201ENST00000562054 433 ntBASIC14.97□□□□□ -0.01
SPG11Q96JI7 AC015911.4-201ENST00000588022 1070 ntBASIC14.97□□□□□ -0.01
SPG11Q96JI7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPG11Q96JI7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPG11Q96JI7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPG11Q96JI7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.97□□□□□ -0.01
SPG11Q96JI7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPG11Q96JI7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SPG11Q96JI7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SPG11Q96JI7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPG11Q96JI7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPG11Q96JI7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPG11Q96JI7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 LINC00628-201ENST00000628516 1289 ntBASIC14.96□□□□□ -0.01
SPG11Q96JI7 AL805961.1-202ENST00000641562 540 ntBASIC14.96□□□□□ -0.01
SPG11Q96JI7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPG11Q96JI7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPG11Q96JI7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPG11Q96JI7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPG11Q96JI7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPG11Q96JI7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPG11Q96JI7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPG11Q96JI7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPG11Q96JI7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPG11Q96JI7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SPG11Q96JI7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SPG11Q96JI7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SPG11Q96JI7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SPG11Q96JI7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.96□□□□□ -0.02
SPG11Q96JI7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SPG11Q96JI7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SPG11Q96JI7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
SPG11Q96JI7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SPG11Q96JI7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPG11Q96JI7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPG11Q96JI7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPG11Q96JI7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 MIR4745-201ENST00000577608 62 ntBASIC14.95□□□□□ -0.02
SPG11Q96JI7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPG11Q96JI7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPG11Q96JI7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPG11Q96JI7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.95□□□□□ -0.02
SPG11Q96JI7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPG11Q96JI7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPG11Q96JI7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPG11Q96JI7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 ADH5P3-201ENST00000433842 1137 ntBASIC14.95□□□□□ -0.02
SPG11Q96JI7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms