Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHDQ96IW2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SHDQ96IW2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHDQ96IW2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHDQ96IW2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.81■□□□□ 0.44
SHDQ96IW2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.81■□□□□ 0.44
SHDQ96IW2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.81■□□□□ 0.44
SHDQ96IW2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SHDQ96IW2 AC023141.5-201ENST00000458585 616 ntBASIC17.81■□□□□ 0.44
SHDQ96IW2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHDQ96IW2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHDQ96IW2 AC067863.1-201ENST00000494933 530 ntBASIC17.81■□□□□ 0.44
SHDQ96IW2 CXCL1P1-201ENST00000502804 216 ntBASIC17.81■□□□□ 0.44
SHDQ96IW2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.81■□□□□ 0.44
SHDQ96IW2 AC109462.3-201ENST00000573934 613 ntBASIC17.81■□□□□ 0.44
SHDQ96IW2 MIR4745-201ENST00000577608 62 ntBASIC17.81■□□□□ 0.44
SHDQ96IW2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.81■□□□□ 0.44
SHDQ96IW2 AC138761.1-201ENST00000584393 385 ntBASIC17.81■□□□□ 0.44
SHDQ96IW2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SHDQ96IW2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.81■□□□□ 0.44
SHDQ96IW2 AL353135.1-201ENST00000606729 504 ntBASIC17.81■□□□□ 0.44
SHDQ96IW2 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.81■□□□□ 0.44
SHDQ96IW2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SHDQ96IW2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SHDQ96IW2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SHDQ96IW2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.81■□□□□ 0.44
SHDQ96IW2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SHDQ96IW2 ANO7L1-203ENST00000602586 1720 ntBASIC17.81■□□□□ 0.44
SHDQ96IW2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.81■□□□□ 0.44
SHDQ96IW2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.8■□□□□ 0.44
SHDQ96IW2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHDQ96IW2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHDQ96IW2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.8■□□□□ 0.44
SHDQ96IW2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SHDQ96IW2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHDQ96IW2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHDQ96IW2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHDQ96IW2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHDQ96IW2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SHDQ96IW2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.8■□□□□ 0.44
SHDQ96IW2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHDQ96IW2 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.8■□□□□ 0.44
SHDQ96IW2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHDQ96IW2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.8■□□□□ 0.44
SHDQ96IW2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHDQ96IW2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.8■□□□□ 0.44
SHDQ96IW2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.8■□□□□ 0.44
SHDQ96IW2 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.8■□□□□ 0.44
SHDQ96IW2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHDQ96IW2 OR7E47P-204ENST00000575924 449 ntBASIC17.8■□□□□ 0.44
SHDQ96IW2 STK25P1-201ENST00000585406 838 ntBASIC17.8■□□□□ 0.44
SHDQ96IW2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.8■□□□□ 0.44
SHDQ96IW2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SHDQ96IW2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.8■□□□□ 0.44
SHDQ96IW2 LINC00628-201ENST00000628516 1289 ntBASIC17.8■□□□□ 0.44
SHDQ96IW2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SHDQ96IW2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
SHDQ96IW2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHDQ96IW2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHDQ96IW2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SHDQ96IW2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHDQ96IW2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SHDQ96IW2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SHDQ96IW2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SHDQ96IW2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SHDQ96IW2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
SHDQ96IW2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.79■□□□□ 0.44
SHDQ96IW2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.79■□□□□ 0.44
SHDQ96IW2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.79■□□□□ 0.44
SHDQ96IW2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.79■□□□□ 0.44
SHDQ96IW2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.79■□□□□ 0.44
SHDQ96IW2 AC112191.1-201ENST00000523689 701 ntBASIC17.79■□□□□ 0.44
SHDQ96IW2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.79■□□□□ 0.44
SHDQ96IW2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.79■□□□□ 0.44
SHDQ96IW2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.79■□□□□ 0.44
SHDQ96IW2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SHDQ96IW2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.79■□□□□ 0.44
SHDQ96IW2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.79■□□□□ 0.44
SHDQ96IW2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHDQ96IW2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms