Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 AC022898.2-201ENST00000616822 1312 ntBASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 NAPSB-206ENST00000562112 1266 ntBASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 AC112497.1-201ENST00000624824 639 ntBASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SLC47A1Q96FL8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 MMP23A-201ENST00000234610 1017 ntBASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SLC47A1Q96FL8 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 AC104390.1-201ENST00000555663 520 ntBASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 AL512604.3-201ENST00000569583 964 ntBASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 MIR3180-4-201ENST00000582223 153 ntBASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SLC47A1Q96FL8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SLC47A1Q96FL8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms