Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TRIM11Q96F44 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRIM11Q96F44 Z83836.1-201ENST00000624605 1642 ntBASIC18.76■□□□□ 0.59
TRIM11Q96F44 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 AC096633.1-201ENST00000422446 749 ntBASIC18.76■□□□□ 0.59
TRIM11Q96F44 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.76■□□□□ 0.59
TRIM11Q96F44 AC022616.7-201ENST00000525383 220 ntBASIC18.76■□□□□ 0.59
TRIM11Q96F44 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.76■□□□□ 0.59
TRIM11Q96F44 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM11Q96F44 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM11Q96F44 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM11Q96F44 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TRIM11Q96F44 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM11Q96F44 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TRIM11Q96F44 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRIM11Q96F44 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
TRIM11Q96F44 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM11Q96F44 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
TRIM11Q96F44 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM11Q96F44 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM11Q96F44 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM11Q96F44 AC104076.2-201ENST00000448912 469 ntBASIC18.75■□□□□ 0.59
TRIM11Q96F44 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.75■□□□□ 0.59
TRIM11Q96F44 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.75■□□□□ 0.59
TRIM11Q96F44 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.75■□□□□ 0.59
TRIM11Q96F44 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.75■□□□□ 0.59
TRIM11Q96F44 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.75■□□□□ 0.59
TRIM11Q96F44 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.75■□□□□ 0.59
TRIM11Q96F44 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRIM11Q96F44 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM11Q96F44 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM11Q96F44 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.75■□□□□ 0.59
TRIM11Q96F44 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM11Q96F44 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM11Q96F44 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM11Q96F44 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM11Q96F44 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 AC108860.2-201ENST00000562760 2183 ntBASIC18.74■□□□□ 0.59
TRIM11Q96F44 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM11Q96F44 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM11Q96F44 AL671277.2-201ENST00000458060 996 ntBASIC18.74■□□□□ 0.59
TRIM11Q96F44 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 AC083849.1-201ENST00000615227 514 ntBASIC18.74■□□□□ 0.59
TRIM11Q96F44 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM11Q96F44 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM11Q96F44 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM11Q96F44 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM11Q96F44 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM11Q96F44 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRIM11Q96F44 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.74■□□□□ 0.59
TRIM11Q96F44 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms