Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF34Q969K3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF34Q969K3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RNF34Q969K3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF34Q969K3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
RNF34Q969K3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RNF34Q969K3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF34Q969K3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF34Q969K3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF34Q969K3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.57■□□□□ 0.56
RNF34Q969K3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF34Q969K3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF34Q969K3 AC012615.1-201ENST00000565797 1299 ntBASIC18.57■□□□□ 0.56
RNF34Q969K3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF34Q969K3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF34Q969K3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF34Q969K3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RNF34Q969K3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF34Q969K3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF34Q969K3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
RNF34Q969K3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF34Q969K3 KRT18P55-202ENST00000578578 1546 ntBASIC18.57■□□□□ 0.56
RNF34Q969K3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF34Q969K3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RNF34Q969K3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF34Q969K3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF34Q969K3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RNF34Q969K3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF34Q969K3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF34Q969K3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF34Q969K3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF34Q969K3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF34Q969K3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF34Q969K3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF34Q969K3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF34Q969K3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
RNF34Q969K3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF34Q969K3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF34Q969K3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF34Q969K3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF34Q969K3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF34Q969K3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF34Q969K3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF34Q969K3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF34Q969K3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RNF34Q969K3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF34Q969K3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF34Q969K3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF34Q969K3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF34Q969K3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.56■□□□□ 0.56
RNF34Q969K3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RNF34Q969K3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF34Q969K3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF34Q969K3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF34Q969K3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF34Q969K3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF34Q969K3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF34Q969K3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF34Q969K3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RNF34Q969K3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RNF34Q969K3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF34Q969K3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF34Q969K3 NSUN5P1-202ENST00000421140 1535 ntBASIC18.55■□□□□ 0.56
RNF34Q969K3 NSUN5P2-203ENST00000457352 1529 ntBASIC18.55■□□□□ 0.56
RNF34Q969K3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF34Q969K3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF34Q969K3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF34Q969K3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF34Q969K3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF34Q969K3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF34Q969K3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF34Q969K3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF34Q969K3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF34Q969K3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF34Q969K3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF34Q969K3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF34Q969K3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF34Q969K3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF34Q969K3 AP005901.3-202ENST00000581653 237 ntBASIC18.55■□□□□ 0.56
RNF34Q969K3 AC099336.1-202ENST00000602961 463 ntBASIC18.55■□□□□ 0.56
RNF34Q969K3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF34Q969K3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF34Q969K3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.55■□□□□ 0.56
RNF34Q969K3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RNF34Q969K3 NOC2LP1-202ENST00000452600 2235 ntBASIC18.55■□□□□ 0.56
RNF34Q969K3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF34Q969K3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF34Q969K3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF34Q969K3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF34Q969K3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RNF34Q969K3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF34Q969K3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RNF34Q969K3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF34Q969K3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF34Q969K3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF34Q969K3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF34Q969K3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF34Q969K3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF34Q969K3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF34Q969K3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms