Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS3Q969F9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
HPS3Q969F9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HPS3Q969F9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HPS3Q969F9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.63■□□□□ 0.73
HPS3Q969F9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.63■□□□□ 0.73
HPS3Q969F9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.63■□□□□ 0.73
HPS3Q969F9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.63■□□□□ 0.73
HPS3Q969F9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.63■□□□□ 0.73
HPS3Q969F9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HPS3Q969F9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
HPS3Q969F9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HPS3Q969F9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HPS3Q969F9 CHCHD2P8-201ENST00000429873 447 ntBASIC19.63■□□□□ 0.73
HPS3Q969F9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HPS3Q969F9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS3Q969F9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.63■□□□□ 0.73
HPS3Q969F9 AL121672.3-201ENST00000608644 468 ntBASIC19.63■□□□□ 0.73
HPS3Q969F9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HPS3Q969F9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS3Q969F9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
HPS3Q969F9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS3Q969F9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS3Q969F9 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS3Q969F9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS3Q969F9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HPS3Q969F9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.62■□□□□ 0.73
HPS3Q969F9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 CROCCP2-202ENST00000412962 2773 ntBASIC19.62■□□□□ 0.73
HPS3Q969F9 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HPS3Q969F9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.62■□□□□ 0.73
HPS3Q969F9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HPS3Q969F9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.62■□□□□ 0.73
HPS3Q969F9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.62■□□□□ 0.73
HPS3Q969F9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HPS3Q969F9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.62■□□□□ 0.73
HPS3Q969F9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.62■□□□□ 0.73
HPS3Q969F9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 AC096633.1-201ENST00000422446 749 ntBASIC19.62■□□□□ 0.73
HPS3Q969F9 TSSC2-201ENST00000450217 709 ntBASIC19.62■□□□□ 0.73
HPS3Q969F9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.62■□□□□ 0.73
HPS3Q969F9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.62■□□□□ 0.73
HPS3Q969F9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.62■□□□□ 0.73
HPS3Q969F9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.62■□□□□ 0.73
HPS3Q969F9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HPS3Q969F9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS3Q969F9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.62■□□□□ 0.73
HPS3Q969F9 HLA-J-201ENST00000462773 1622 ntBASIC19.62■□□□□ 0.73
HPS3Q969F9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HPS3Q969F9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS3Q969F9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS3Q969F9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS3Q969F9 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS3Q969F9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HPS3Q969F9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HPS3Q969F9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.61■□□□□ 0.73
HPS3Q969F9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS3Q969F9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS3Q969F9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.61■□□□□ 0.73
HPS3Q969F9 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS3Q969F9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.61■□□□□ 0.73
HPS3Q969F9 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HPS3Q969F9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HPS3Q969F9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HPS3Q969F9 AC007967.3-201ENST00000434308 558 ntBASIC19.61■□□□□ 0.73
HPS3Q969F9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS3Q969F9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.61■□□□□ 0.73
HPS3Q969F9 AP000550.4-202ENST00000639755 178 ntBASIC19.61■□□□□ 0.73
HPS3Q969F9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HPS3Q969F9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
HPS3Q969F9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS3Q969F9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HPS3Q969F9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HPS3Q969F9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.61■□□□□ 0.73
HPS3Q969F9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
HPS3Q969F9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS3Q969F9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HPS3Q969F9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
HPS3Q969F9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS3Q969F9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS3Q969F9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.6■□□□□ 0.73
HPS3Q969F9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HPS3Q969F9 AC125634.1-201ENST00000438758 1403 ntBASIC19.6■□□□□ 0.73
HPS3Q969F9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms