Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
USP9XQ93008 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP9XQ93008 AC079776.1-201ENST00000401540 1152 ntBASIC15.31■□□□□ 0.04
USP9XQ93008 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.31■□□□□ 0.04
USP9XQ93008 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.31■□□□□ 0.04
USP9XQ93008 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.31■□□□□ 0.04
USP9XQ93008 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP9XQ93008 MIR6805-201ENST00000615055 62 ntBASIC15.31■□□□□ 0.04
USP9XQ93008 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP9XQ93008 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP9XQ93008 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP9XQ93008 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.31■□□□□ 0.04
USP9XQ93008 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.31■□□□□ 0.04
USP9XQ93008 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP9XQ93008 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.31■□□□□ 0.04
USP9XQ93008 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
USP9XQ93008 AC093484.2-201ENST00000580996 2166 ntBASIC15.31■□□□□ 0.04
USP9XQ93008 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.31■□□□□ 0.04
USP9XQ93008 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.31■□□□□ 0.04
USP9XQ93008 SPTLC1P1-201ENST00000447199 261 ntBASIC15.31■□□□□ 0.04
USP9XQ93008 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.31■□□□□ 0.04
USP9XQ93008 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.31■□□□□ 0.04
USP9XQ93008 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.31■□□□□ 0.04
USP9XQ93008 AL135744.1-201ENST00000565098 629 ntBASIC15.31■□□□□ 0.04
USP9XQ93008 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.3■□□□□ 0.04
USP9XQ93008 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
USP9XQ93008 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
USP9XQ93008 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.3■□□□□ 0.04
USP9XQ93008 ESPNP-201ENST00000270691 2015 ntBASIC15.3■□□□□ 0.04
USP9XQ93008 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
USP9XQ93008 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP9XQ93008 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
USP9XQ93008 AC103564.2-201ENST00000432853 1299 ntBASIC15.3■□□□□ 0.04
USP9XQ93008 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.3■□□□□ 0.04
USP9XQ93008 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.3■□□□□ 0.04
USP9XQ93008 AC097493.3-201ENST00000509725 367 ntBASIC15.3■□□□□ 0.04
USP9XQ93008 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
USP9XQ93008 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.3■□□□□ 0.04
USP9XQ93008 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
USP9XQ93008 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP9XQ93008 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP9XQ93008 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
USP9XQ93008 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP9XQ93008 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP9XQ93008 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP9XQ93008 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
USP9XQ93008 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP9XQ93008 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP9XQ93008 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
USP9XQ93008 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
USP9XQ93008 AC002056.1-201ENST00000395613 760 ntBASIC15.3■□□□□ 0.04
USP9XQ93008 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.3■□□□□ 0.04
USP9XQ93008 GPR53P-205ENST00000457298 1084 ntBASIC15.3■□□□□ 0.04
USP9XQ93008 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP9XQ93008 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.29■□□□□ 0.04
USP9XQ93008 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP9XQ93008 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.29■□□□□ 0.04
USP9XQ93008 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
USP9XQ93008 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
USP9XQ93008 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
USP9XQ93008 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP9XQ93008 AL133338.1-201ENST00000565695 1517 ntBASIC15.29■□□□□ 0.04
USP9XQ93008 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
USP9XQ93008 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP9XQ93008 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP9XQ93008 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP9XQ93008 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
USP9XQ93008 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP9XQ93008 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP9XQ93008 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP9XQ93008 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.29■□□□□ 0.04
USP9XQ93008 AC004890.2-204ENST00000481968 304 ntBASIC15.29■□□□□ 0.04
USP9XQ93008 SLC25A39P2-201ENST00000537614 270 ntBASIC15.29■□□□□ 0.04
USP9XQ93008 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.29■□□□□ 0.04
USP9XQ93008 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
USP9XQ93008 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.29■□□□□ 0.04
USP9XQ93008 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP9XQ93008 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP9XQ93008 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP9XQ93008 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP9XQ93008 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
USP9XQ93008 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.29■□□□□ 0.04
USP9XQ93008 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.29■□□□□ 0.04
USP9XQ93008 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.29■□□□□ 0.04
USP9XQ93008 AC084121.4-201ENST00000641598 221 ntBASIC15.29■□□□□ 0.04
USP9XQ93008 AF228730.8-201ENST00000642140 221 ntBASIC15.29■□□□□ 0.04
USP9XQ93008 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.28■□□□□ 0.04
USP9XQ93008 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.28■□□□□ 0.04
USP9XQ93008 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
USP9XQ93008 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 AFG3L1P-217ENST00000557444 2447 ntBASIC15.28■□□□□ 0.04
USP9XQ93008 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms