Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 C20orf181-201ENST00000623918 480 ntBASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC27.32■■□□□ 1.96
CASKIN1Q8WXD9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CASKIN1Q8WXD9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
CASKIN1Q8WXD9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CASKIN1Q8WXD9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CASKIN1Q8WXD9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC27.31■■□□□ 1.96
CASKIN1Q8WXD9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
CASKIN1Q8WXD9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
CASKIN1Q8WXD9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CASKIN1Q8WXD9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC27.31■■□□□ 1.96
CASKIN1Q8WXD9 MKNK2P1-201ENST00000437526 628 ntBASIC27.31■■□□□ 1.96
CASKIN1Q8WXD9 AC096734.2-201ENST00000562054 433 ntBASIC27.31■■□□□ 1.96
CASKIN1Q8WXD9 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC27.31■■□□□ 1.96
CASKIN1Q8WXD9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CASKIN1Q8WXD9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CASKIN1Q8WXD9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CASKIN1Q8WXD9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 AC046185.3-201ENST00000623228 1824 ntBASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 AC211486.1-202ENST00000416371 468 ntBASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 AC211476.1-201ENST00000503899 468 ntBASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 KRT19P2-202ENST00000557173 1012 ntBASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 TK1-204ENST00000590430 683 ntTSL 3 BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 BICD1-207ENST00000551848 1962 ntBASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 AL135999.2-201ENST00000622438 1686 ntBASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
CASKIN1Q8WXD9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CASKIN1Q8WXD9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CASKIN1Q8WXD9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CASKIN1Q8WXD9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CASKIN1Q8WXD9 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
CASKIN1Q8WXD9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CASKIN1Q8WXD9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC27.29■■□□□ 1.96
CASKIN1Q8WXD9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CASKIN1Q8WXD9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC27.29■■□□□ 1.96
CASKIN1Q8WXD9 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CASKIN1Q8WXD9 AL078644.1-201ENST00000609881 752 ntBASIC27.29■■□□□ 1.96
CASKIN1Q8WXD9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC27.29■■□□□ 1.96
CASKIN1Q8WXD9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CASKIN1Q8WXD9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CASKIN1Q8WXD9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC27.29■■□□□ 1.96
CASKIN1Q8WXD9 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 CD63-210ENST00000550776 870 ntTSL 5 BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 LINC00304-203ENST00000565008 1864 ntBASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CASKIN1Q8WXD9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC27.27■■□□□ 1.96
CASKIN1Q8WXD9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC27.27■■□□□ 1.96
CASKIN1Q8WXD9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CASKIN1Q8WXD9 PAWRP1-201ENST00000451083 565 ntBASIC27.27■■□□□ 1.96
CASKIN1Q8WXD9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC27.27■■□□□ 1.96
CASKIN1Q8WXD9 AC005829.1-201ENST00000570002 483 ntBASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms