Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CT55Q8WUE5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CT55Q8WUE5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CT55Q8WUE5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CT55Q8WUE5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
CT55Q8WUE5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CT55Q8WUE5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.45■□□□□ 0.22
CT55Q8WUE5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CT55Q8WUE5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CT55Q8WUE5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CT55Q8WUE5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CT55Q8WUE5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.45■□□□□ 0.22
CT55Q8WUE5 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CT55Q8WUE5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.45■□□□□ 0.22
CT55Q8WUE5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CT55Q8WUE5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CT55Q8WUE5 AC004967.1-201ENST00000453589 447 ntBASIC16.45■□□□□ 0.22
CT55Q8WUE5 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.45■□□□□ 0.22
CT55Q8WUE5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.45■□□□□ 0.22
CT55Q8WUE5 IGHV3-52-201ENST00000519770 353 ntBASIC16.45■□□□□ 0.22
CT55Q8WUE5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.45■□□□□ 0.22
CT55Q8WUE5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.45■□□□□ 0.22
CT55Q8WUE5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.45■□□□□ 0.22
CT55Q8WUE5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
CT55Q8WUE5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CT55Q8WUE5 AP001160.2-201ENST00000596071 487 ntBASIC16.45■□□□□ 0.22
CT55Q8WUE5 MTDHP5-201ENST00000598980 586 ntBASIC16.45■□□□□ 0.22
CT55Q8WUE5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CT55Q8WUE5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CT55Q8WUE5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CT55Q8WUE5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CT55Q8WUE5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CT55Q8WUE5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CT55Q8WUE5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CT55Q8WUE5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CT55Q8WUE5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CT55Q8WUE5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CT55Q8WUE5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
CT55Q8WUE5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CT55Q8WUE5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.44■□□□□ 0.22
CT55Q8WUE5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CT55Q8WUE5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CT55Q8WUE5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.44■□□□□ 0.22
CT55Q8WUE5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CT55Q8WUE5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CT55Q8WUE5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CT55Q8WUE5 REXO1L9P-201ENST00000604264 2108 ntBASIC16.44■□□□□ 0.22
CT55Q8WUE5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CT55Q8WUE5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.44■□□□□ 0.22
CT55Q8WUE5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CT55Q8WUE5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CT55Q8WUE5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CT55Q8WUE5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CT55Q8WUE5 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.43■□□□□ 0.22
CT55Q8WUE5 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CT55Q8WUE5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CT55Q8WUE5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CT55Q8WUE5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CT55Q8WUE5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CT55Q8WUE5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 IGHV3-65-201ENST00000523210 341 ntBASIC16.43■□□□□ 0.22
CT55Q8WUE5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 AC008667.4-201ENST00000607370 168 ntBASIC16.43■□□□□ 0.22
CT55Q8WUE5 AC134684.3-201ENST00000641758 218 ntBASIC16.43■□□□□ 0.22
CT55Q8WUE5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CT55Q8WUE5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CT55Q8WUE5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CT55Q8WUE5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CT55Q8WUE5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CT55Q8WUE5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CT55Q8WUE5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CT55Q8WUE5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CT55Q8WUE5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CT55Q8WUE5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CT55Q8WUE5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CT55Q8WUE5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CT55Q8WUE5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CT55Q8WUE5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CT55Q8WUE5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CT55Q8WUE5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CT55Q8WUE5 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CT55Q8WUE5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms