Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 AC108751.1-201ENST00000490852 363 ntBASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 AC005593.1-201ENST00000624894 515 ntBASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
U2AF1L4Q8WU68 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 AC002310.6-201ENST00000624451 1377 ntBASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 SPCS2P1-201ENST00000561636 679 ntBASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 PGM5P2-202ENST00000637225 1043 ntBASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
U2AF1L4Q8WU68 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 HLA-J-203ENST00000494367 1087 ntBASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
U2AF1L4Q8WU68 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 KRT18P27-201ENST00000427733 1299 ntBASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 KRT18P41-201ENST00000518924 1277 ntBASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.22■□□□□ 0.83
U2AF1L4Q8WU68 C20orf181-201ENST00000623918 480 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms