Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 INGX-201ENST00000359239 846 ntBASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPS4Y2Q8TD47 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPS4Y2Q8TD47 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPS4Y2Q8TD47 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RPS4Y2Q8TD47 AC105020.1-201ENST00000435356 2205 ntBASIC15.52■□□□□ 0.07
RPS4Y2Q8TD47 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPS4Y2Q8TD47 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RPS4Y2Q8TD47 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPS4Y2Q8TD47 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPS4Y2Q8TD47 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
RPS4Y2Q8TD47 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.52■□□□□ 0.07
RPS4Y2Q8TD47 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPS4Y2Q8TD47 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.52■□□□□ 0.07
RPS4Y2Q8TD47 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.52■□□□□ 0.07
RPS4Y2Q8TD47 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 MMP23A-201ENST00000234610 1017 ntBASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 SLC25A1P3-201ENST00000395415 828 ntBASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 AL157888.1-201ENST00000631930 593 ntBASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 BX276092.7-203ENST00000637198 1536 ntBASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPS4Y2Q8TD47 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 MIR1238-201ENST00000408483 83 ntBASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.5■□□□□ 0.07
RPS4Y2Q8TD47 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms