Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SIMC1Q8NDZ2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 AC009154.2-201ENST00000621177 724 ntBASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 AC016734.2-201ENST00000624325 1377 ntBASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.73■□□□□ 0.27
SIMC1Q8NDZ2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 PCDHA12-202ENST00000613593 2588 ntBASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 AL845331.1-201ENST00000424978 1190 ntBASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 IER3-202ENST00000376377 1350 ntBASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 AC009949.1-201ENST00000623048 1830 ntBASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SIMC1Q8NDZ2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 RN7SL606P-201ENST00000472779 293 ntBASIC16.71■□□□□ 0.27
SIMC1Q8NDZ2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms