Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 AC005336.2-201ENST00000593183 939 ntBASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.19■□□□□ 0.5
ATPAF2Q8N5M1 AL355312.1-201ENST00000407115 2176 ntBASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 PCDHB18P-201ENST00000524813 2368 ntBASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 UPK3BP1-201ENST00000428678 509 ntBASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 Z69720.1-201ENST00000601483 472 ntBASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.18■□□□□ 0.5
ATPAF2Q8N5M1 AC233702.3-201ENST00000578656 1387 ntBASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 AC125634.1-201ENST00000438758 1403 ntBASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 AC091607.1-201ENST00000490318 1060 ntBASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 AC092119.3-201ENST00000612618 583 ntBASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 NPAP1P7-201ENST00000613027 823 ntBASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ATPAF2Q8N5M1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
ATPAF2Q8N5M1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.16■□□□□ 0.5
ATPAF2Q8N5M1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATPAF2Q8N5M1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATPAF2Q8N5M1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATPAF2Q8N5M1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATPAF2Q8N5M1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATPAF2Q8N5M1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATPAF2Q8N5M1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.16■□□□□ 0.5
ATPAF2Q8N5M1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.16■□□□□ 0.5
ATPAF2Q8N5M1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.16■□□□□ 0.5
ATPAF2Q8N5M1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATPAF2Q8N5M1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATPAF2Q8N5M1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms