Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 AC136428.2-201ENST00000563187 214 ntBASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 AF131216.4-201ENST00000638924 1588 ntBASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SMIM20Q8N5G0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM20Q8N5G0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM20Q8N5G0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM20Q8N5G0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM20Q8N5G0 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.02□□□□□ -0.64
SMIM20Q8N5G0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM20Q8N5G0 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM20Q8N5G0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM20Q8N5G0 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.02□□□□□ -0.64
SMIM20Q8N5G0 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
SMIM20Q8N5G0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC11.02□□□□□ -0.64
SMIM20Q8N5G0 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 AC097358.2-201ENST00000607541 1159 ntBASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 AC005703.6-201ENST00000623265 1329 ntBASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SMIM20Q8N5G0 DGCR9-201ENST00000609630 2415 ntBASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 AC117489.1-201ENST00000625169 3217 ntBASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SMIM20Q8N5G0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms