Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 AC064862.7-201ENST00000604520 867 ntBASIC16.46■□□□□ 0.23
BEST3Q8N1M1 AP001269.4-201ENST00000609611 512 ntBASIC16.46■□□□□ 0.23
BEST3Q8N1M1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST3Q8N1M1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
BEST3Q8N1M1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.46■□□□□ 0.22
BEST3Q8N1M1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BEST3Q8N1M1 HLA-A-201ENST00000376802 1334 ntBASIC16.45■□□□□ 0.22
BEST3Q8N1M1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 MTDHP3-201ENST00000594186 672 ntBASIC16.45■□□□□ 0.22
BEST3Q8N1M1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 AL355877.3-201ENST00000622820 899 ntBASIC16.45■□□□□ 0.22
BEST3Q8N1M1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 AP000997.3-201ENST00000623333 2250 ntBASIC16.45■□□□□ 0.22
BEST3Q8N1M1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST3Q8N1M1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 RBM17P3-201ENST00000417687 1192 ntBASIC16.44■□□□□ 0.22
BEST3Q8N1M1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 AF186996.4-201ENST00000467186 377 ntBASIC16.44■□□□□ 0.22
BEST3Q8N1M1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 AL773604.1-201ENST00000617417 272 ntBASIC16.44■□□□□ 0.22
BEST3Q8N1M1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST3Q8N1M1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.43■□□□□ 0.22
BEST3Q8N1M1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms