Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
COL27A1Q8IZC6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL27A1Q8IZC6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 AL627223.1-201ENST00000416693 442 ntBASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 BCRP1-201ENST00000444246 691 ntBASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL27A1Q8IZC6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 AL513480.1-201ENST00000451731 511 ntBASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 AC074386.1-202ENST00000463561 864 ntBASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.52■□□□□ 0.23
COL27A1Q8IZC6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL27A1Q8IZC6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms