Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 GNAS-203ENST00000306120 1878 ntBASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SCUBE3Q8IX30 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.58
SCUBE3Q8IX30 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
SCUBE3Q8IX30 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.64■□□□□ 0.58
SCUBE3Q8IX30 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
SCUBE3Q8IX30 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.64■□□□□ 0.58
SCUBE3Q8IX30 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.64■□□□□ 0.58
SCUBE3Q8IX30 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 COX5BP2-201ENST00000392354 334 ntBASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 RCN1P2-201ENST00000398357 915 ntBASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCUBE3Q8IX30 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 AC096582.2-201ENST00000510860 516 ntBASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 FOSL1P1-201ENST00000511041 816 ntBASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 AC138894.3-201ENST00000603787 634 ntBASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 BX276092.7-203ENST00000637198 1536 ntBASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCUBE3Q8IX30 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.62■□□□□ 0.57
SCUBE3Q8IX30 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCUBE3Q8IX30 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCUBE3Q8IX30 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCUBE3Q8IX30 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCUBE3Q8IX30 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms