Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 KRT8P50-201ENST00000562022 1438 ntBASIC16.64■□□□□ 0.25
CCDC71Q8IV32 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.64■□□□□ 0.25
CCDC71Q8IV32 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 MIR3652-201ENST00000579335 131 ntBASIC16.64■□□□□ 0.25
CCDC71Q8IV32 AC011498.5-201ENST00000592027 486 ntBASIC16.64■□□□□ 0.25
CCDC71Q8IV32 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC71Q8IV32 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 TSSC2-201ENST00000450217 709 ntBASIC16.63■□□□□ 0.25
CCDC71Q8IV32 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC71Q8IV32 AL355312.1-201ENST00000407115 2176 ntBASIC16.62■□□□□ 0.25
CCDC71Q8IV32 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 SDHAP2-201ENST00000455183 2001 ntBASIC16.62■□□□□ 0.25
CCDC71Q8IV32 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 AP000593.1-201ENST00000393668 712 ntBASIC16.62■□□□□ 0.25
CCDC71Q8IV32 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 BX276092.5-203ENST00000456199 560 ntBASIC16.62■□□□□ 0.25
CCDC71Q8IV32 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 SEC1P-202ENST00000473944 940 ntBASIC16.62■□□□□ 0.25
CCDC71Q8IV32 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 PRELID1P1-202ENST00000567272 903 ntBASIC16.62■□□□□ 0.25
CCDC71Q8IV32 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 AL121672.3-201ENST00000608644 468 ntBASIC16.62■□□□□ 0.25
CCDC71Q8IV32 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 AL157888.1-201ENST00000631930 593 ntBASIC16.62■□□□□ 0.25
CCDC71Q8IV32 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
CCDC71Q8IV32 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms