Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 AC104390.1-201ENST00000555663 520 ntBASIC11.76□□□□□ -0.53
SCXQ7RTU7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 AP002414.4-201ENST00000589764 1148 ntBASIC11.76□□□□□ -0.53
SCXQ7RTU7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 KRT8P32-201ENST00000512863 1461 ntBASIC11.76□□□□□ -0.53
SCXQ7RTU7 BICD1-207ENST00000551848 1962 ntBASIC11.76□□□□□ -0.53
SCXQ7RTU7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCXQ7RTU7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC11.76□□□□□ -0.53
SCXQ7RTU7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 MIR662-201ENST00000384847 95 ntBASIC11.75□□□□□ -0.53
SCXQ7RTU7 MIR564-202ENST00000385049 94 ntBASIC11.75□□□□□ -0.53
SCXQ7RTU7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 AC026396.1-201ENST00000419388 421 ntBASIC11.75□□□□□ -0.53
SCXQ7RTU7 TSPY22P-201ENST00000427496 604 ntBASIC11.75□□□□□ -0.53
SCXQ7RTU7 CHCHD2P8-201ENST00000429873 447 ntBASIC11.75□□□□□ -0.53
SCXQ7RTU7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
SCXQ7RTU7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCXQ7RTU7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms