Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 AC105020.1-201ENST00000435356 2205 ntBASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 PCDHA14-201ENST00000506751 2298 ntBASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 AC016396.2-201ENST00000562575 1417 ntBASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 PCDHB19P-201ENST00000570871 2371 ntBASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 KRT18P29-201ENST00000397031 1267 ntBASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LINC00242Q5T6M2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 BX088651.1-201ENST00000540551 451 ntBASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
LINC00242Q5T6M2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms