Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 PRORSD1P-202ENST00000563365 2154 ntBASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 RCC2P3-201ENST00000418112 1537 ntBASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 NUS1P1-201ENST00000446295 882 ntBASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 AC011498.5-201ENST00000592027 486 ntBASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRFAM7AQ494W8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 UNC93B7-201ENST00000509439 705 ntBASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 IFNL4P1-201ENST00000607083 540 ntBASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 AC004263.2-201ENST00000617183 678 ntBASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CHRFAM7AQ494W8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRFAM7AQ494W8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.53■□□□□ 0.08
CHRFAM7AQ494W8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CHRFAM7AQ494W8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms