Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
HSPG2P98160 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC10.85□□□□□ -0.67
HSPG2P98160 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC10.85□□□□□ -0.67
HSPG2P98160 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
HSPG2P98160 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 AC007952.6-201ENST00000573168 2673 ntBASIC10.85□□□□□ -0.67
HSPG2P98160 AC003957.1-201ENST00000625108 2673 ntBASIC10.85□□□□□ -0.67
HSPG2P98160 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 MIR346-201ENST00000362234 95 ntBASIC10.85□□□□□ -0.67
HSPG2P98160 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
HSPG2P98160 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC10.85□□□□□ -0.67
HSPG2P98160 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
HSPG2P98160 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC10.85□□□□□ -0.67
HSPG2P98160 USB1-203ENST00000539737 1212 ntTSL 2 BASIC10.85□□□□□ -0.67
HSPG2P98160 NAA38-206ENST00000576384 424 ntTSL 2 BASIC10.85□□□□□ -0.67
HSPG2P98160 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC10.85□□□□□ -0.67
HSPG2P98160 PCDHAC2-203ENST00000615316 3011 ntBASIC10.85□□□□□ -0.67
HSPG2P98160 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
HSPG2P98160 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC10.85□□□□□ -0.67
HSPG2P98160 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
HSPG2P98160 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 AL671277.1-201ENST00000429656 993 ntBASIC10.84□□□□□ -0.67
HSPG2P98160 PTPA-220ENST00000436883 532 ntTSL 4 BASIC10.84□□□□□ -0.67
HSPG2P98160 RN7SL589P-201ENST00000481268 310 ntBASIC10.84□□□□□ -0.67
HSPG2P98160 IGHV3OR16-16-201ENST00000563644 343 ntBASIC10.84□□□□□ -0.67
HSPG2P98160 AC104794.3-201ENST00000566840 1248 ntBASIC10.84□□□□□ -0.67
HSPG2P98160 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC10.84□□□□□ -0.67
HSPG2P98160 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC10.84□□□□□ -0.67
HSPG2P98160 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
HSPG2P98160 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
HSPG2P98160 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
HSPG2P98160 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 TMEM14DP-201ENST00000422205 345 ntBASIC10.84□□□□□ -0.67
HSPG2P98160 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC10.84□□□□□ -0.67
HSPG2P98160 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC10.84□□□□□ -0.67
HSPG2P98160 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC10.84□□□□□ -0.67
HSPG2P98160 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC10.84□□□□□ -0.67
HSPG2P98160 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC10.84□□□□□ -0.67
HSPG2P98160 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
HSPG2P98160 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC10.84□□□□□ -0.67
HSPG2P98160 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC10.84□□□□□ -0.67
HSPG2P98160 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC10.84□□□□□ -0.67
HSPG2P98160 AL133338.1-201ENST00000565695 1517 ntBASIC10.84□□□□□ -0.67
HSPG2P98160 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 COX5BP2-201ENST00000392354 334 ntBASIC10.84□□□□□ -0.67
HSPG2P98160 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC10.84□□□□□ -0.67
HSPG2P98160 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
HSPG2P98160 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC10.84□□□□□ -0.67
HSPG2P98160 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
HSPG2P98160 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
HSPG2P98160 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC10.84□□□□□ -0.67
HSPG2P98160 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC10.84□□□□□ -0.67
HSPG2P98160 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
HSPG2P98160 BNIP3P42-201ENST00000454982 569 ntBASIC10.84□□□□□ -0.67
HSPG2P98160 GIMAP3P-201ENST00000495150 836 ntBASIC10.84□□□□□ -0.67
HSPG2P98160 IGHV3-42-201ENST00000520410 361 ntBASIC10.84□□□□□ -0.67
HSPG2P98160 SNX29P1-201ENST00000548357 1007 ntBASIC10.84□□□□□ -0.67
HSPG2P98160 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC10.84□□□□□ -0.67
HSPG2P98160 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
HSPG2P98160 BNIP3P29-201ENST00000598302 571 ntBASIC10.84□□□□□ -0.67
HSPG2P98160 AC011447.5-201ENST00000616168 564 ntBASIC10.84□□□□□ -0.67
HSPG2P98160 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC10.83□□□□□ -0.68
HSPG2P98160 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC10.83□□□□□ -0.68
HSPG2P98160 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HSPG2P98160 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
HSPG2P98160 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
HSPG2P98160 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
HSPG2P98160 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
HSPG2P98160 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
HSPG2P98160 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC10.83□□□□□ -0.68
HSPG2P98160 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HSPG2P98160 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
HSPG2P98160 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC10.83□□□□□ -0.68
HSPG2P98160 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC10.83□□□□□ -0.68
HSPG2P98160 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
HSPG2P98160 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
HSPG2P98160 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
HSPG2P98160 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC10.83□□□□□ -0.68
HSPG2P98160 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms