Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
IRX3P78415 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.59■□□□□ 0.89
IRX3P78415 AC010460.3-201ENST00000511359 1579 ntBASIC20.59■□□□□ 0.89
IRX3P78415 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
IRX3P78415 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
IRX3P78415 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IRX3P78415 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.58■□□□□ 0.89
IRX3P78415 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
IRX3P78415 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IRX3P78415 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
IRX3P78415 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
IRX3P78415 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IRX3P78415 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
IRX3P78415 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IRX3P78415 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.58■□□□□ 0.89
IRX3P78415 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.58■□□□□ 0.89
IRX3P78415 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.58■□□□□ 0.89
IRX3P78415 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
IRX3P78415 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IRX3P78415 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
IRX3P78415 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.58■□□□□ 0.89
IRX3P78415 AC073592.4-201ENST00000623827 446 ntBASIC20.58■□□□□ 0.89
IRX3P78415 PGM5P2-202ENST00000637225 1043 ntBASIC20.58■□□□□ 0.89
IRX3P78415 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IRX3P78415 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
IRX3P78415 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
IRX3P78415 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
IRX3P78415 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
IRX3P78415 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.58■□□□□ 0.88
IRX3P78415 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
IRX3P78415 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.58■□□□□ 0.88
IRX3P78415 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
IRX3P78415 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
IRX3P78415 AC004817.3-201ENST00000602957 2129 ntBASIC20.57■□□□□ 0.88
IRX3P78415 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
IRX3P78415 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.57■□□□□ 0.88
IRX3P78415 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
IRX3P78415 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
IRX3P78415 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IRX3P78415 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
IRX3P78415 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
IRX3P78415 AC004832.2-201ENST00000426397 482 ntBASIC20.57■□□□□ 0.88
IRX3P78415 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.57■□□□□ 0.88
IRX3P78415 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.57■□□□□ 0.88
IRX3P78415 AC004967.1-201ENST00000453589 447 ntBASIC20.57■□□□□ 0.88
IRX3P78415 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.57■□□□□ 0.88
IRX3P78415 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.57■□□□□ 0.88
IRX3P78415 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.57■□□□□ 0.88
IRX3P78415 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
IRX3P78415 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
IRX3P78415 AP001160.2-201ENST00000596071 487 ntBASIC20.57■□□□□ 0.88
IRX3P78415 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.57■□□□□ 0.88
IRX3P78415 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.57■□□□□ 0.88
IRX3P78415 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
IRX3P78415 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
IRX3P78415 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.56■□□□□ 0.88
IRX3P78415 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.56■□□□□ 0.88
IRX3P78415 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
IRX3P78415 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
IRX3P78415 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.56■□□□□ 0.88
IRX3P78415 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.56■□□□□ 0.88
IRX3P78415 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.56■□□□□ 0.88
IRX3P78415 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.56■□□□□ 0.88
IRX3P78415 AC023274.1-201ENST00000418278 595 ntBASIC20.56■□□□□ 0.88
IRX3P78415 KRT18P27-201ENST00000427733 1299 ntBASIC20.56■□□□□ 0.88
IRX3P78415 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
IRX3P78415 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.56■□□□□ 0.88
IRX3P78415 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.56■□□□□ 0.88
IRX3P78415 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.56■□□□□ 0.88
IRX3P78415 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.56■□□□□ 0.88
IRX3P78415 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.56■□□□□ 0.88
IRX3P78415 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
IRX3P78415 AD001527.2-201ENST00000622994 785 ntBASIC20.56■□□□□ 0.88
IRX3P78415 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.56■□□□□ 0.88
IRX3P78415 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
IRX3P78415 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.56■□□□□ 0.88
IRX3P78415 TNXA-203ENST00000507684 2038 ntBASIC20.56■□□□□ 0.88
IRX3P78415 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
IRX3P78415 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms