Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.81■□□□□ 0.28
RAE1P78406 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.81■□□□□ 0.28
RAE1P78406 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.81■□□□□ 0.28
RAE1P78406 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RAE1P78406 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAE1P78406 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAE1P78406 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.81■□□□□ 0.28
RAE1P78406 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAE1P78406 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.8■□□□□ 0.28
RAE1P78406 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RAE1P78406 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RAE1P78406 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RAE1P78406 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 AC005332.1-201ENST00000577698 1310 ntBASIC16.8■□□□□ 0.28
RAE1P78406 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RAE1P78406 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.8■□□□□ 0.28
RAE1P78406 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
RAE1P78406 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAE1P78406 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 AC007967.3-201ENST00000434308 558 ntBASIC16.8■□□□□ 0.28
RAE1P78406 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.8■□□□□ 0.28
RAE1P78406 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.8■□□□□ 0.28
RAE1P78406 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.8■□□□□ 0.28
RAE1P78406 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RAE1P78406 NTF6B-201ENST00000591913 560 ntBASIC16.8■□□□□ 0.28
RAE1P78406 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.8■□□□□ 0.28
RAE1P78406 AL121956.5-201ENST00000625261 221 ntBASIC16.8■□□□□ 0.28
RAE1P78406 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAE1P78406 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.8■□□□□ 0.28
RAE1P78406 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.8■□□□□ 0.28
RAE1P78406 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.8■□□□□ 0.28
RAE1P78406 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.8■□□□□ 0.28
RAE1P78406 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAE1P78406 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAE1P78406 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.8■□□□□ 0.28
RAE1P78406 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAE1P78406 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.79■□□□□ 0.28
RAE1P78406 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RAE1P78406 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 AC125634.1-201ENST00000438758 1403 ntBASIC16.79■□□□□ 0.28
RAE1P78406 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RAE1P78406 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.79■□□□□ 0.28
RAE1P78406 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
RAE1P78406 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.79■□□□□ 0.28
RAE1P78406 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.79■□□□□ 0.28
RAE1P78406 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.79■□□□□ 0.28
RAE1P78406 FAM86EP-206ENST00000510506 987 ntBASIC16.79■□□□□ 0.28
RAE1P78406 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.79■□□□□ 0.28
RAE1P78406 KRT8P26-201ENST00000534154 1276 ntBASIC16.79■□□□□ 0.28
RAE1P78406 AL049597.2-201ENST00000565575 961 ntBASIC16.79■□□□□ 0.28
RAE1P78406 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.79■□□□□ 0.28
RAE1P78406 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.79■□□□□ 0.28
RAE1P78406 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.79■□□□□ 0.28
RAE1P78406 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAE1P78406 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.79■□□□□ 0.28
RAE1P78406 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
RAE1P78406 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAE1P78406 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAE1P78406 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAE1P78406 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.78■□□□□ 0.28
RAE1P78406 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms