Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEP78395 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PRAMEP78395 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.91■□□□□ 0.46
PRAMEP78395 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.91■□□□□ 0.46
PRAMEP78395 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEP78395 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEP78395 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEP78395 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEP78395 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEP78395 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.91■□□□□ 0.46
PRAMEP78395 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.91■□□□□ 0.46
PRAMEP78395 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PRAMEP78395 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.91■□□□□ 0.46
PRAMEP78395 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.91■□□□□ 0.46
PRAMEP78395 AC083849.1-201ENST00000615227 514 ntBASIC17.91■□□□□ 0.46
PRAMEP78395 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.91■□□□□ 0.46
PRAMEP78395 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.91■□□□□ 0.46
PRAMEP78395 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEP78395 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEP78395 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEP78395 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEP78395 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
PRAMEP78395 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
PRAMEP78395 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEP78395 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEP78395 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.91■□□□□ 0.46
PRAMEP78395 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEP78395 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRAMEP78395 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEP78395 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.9■□□□□ 0.46
PRAMEP78395 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEP78395 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.9■□□□□ 0.46
PRAMEP78395 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEP78395 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEP78395 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEP78395 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.9■□□□□ 0.46
PRAMEP78395 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEP78395 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.9■□□□□ 0.46
PRAMEP78395 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEP78395 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.9■□□□□ 0.46
PRAMEP78395 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEP78395 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEP78395 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.9■□□□□ 0.46
PRAMEP78395 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.9■□□□□ 0.46
PRAMEP78395 AC005332.3-201ENST00000589904 676 ntBASIC17.9■□□□□ 0.46
PRAMEP78395 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.9■□□□□ 0.46
PRAMEP78395 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEP78395 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.9■□□□□ 0.46
PRAMEP78395 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEP78395 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.9■□□□□ 0.46
PRAMEP78395 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.9■□□□□ 0.46
PRAMEP78395 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEP78395 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEP78395 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRAMEP78395 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PRAMEP78395 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PRAMEP78395 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEP78395 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEP78395 AC009949.1-201ENST00000623048 1830 ntBASIC17.89■□□□□ 0.45
PRAMEP78395 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.89■□□□□ 0.45
PRAMEP78395 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEP78395 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEP78395 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.89■□□□□ 0.45
PRAMEP78395 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.89■□□□□ 0.45
PRAMEP78395 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEP78395 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.89■□□□□ 0.45
PRAMEP78395 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PRAMEP78395 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.89■□□□□ 0.45
PRAMEP78395 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEP78395 Z83836.1-201ENST00000624605 1642 ntBASIC17.89■□□□□ 0.45
PRAMEP78395 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEP78395 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.89■□□□□ 0.45
PRAMEP78395 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
PRAMEP78395 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEP78395 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEP78395 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEP78395 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PRAMEP78395 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.89■□□□□ 0.45
PRAMEP78395 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEP78395 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PRAMEP78395 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PRAMEP78395 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PRAMEP78395 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.88■□□□□ 0.45
PRAMEP78395 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 AC099398.1-201ENST00000567919 2776 ntBASIC17.88■□□□□ 0.45
PRAMEP78395 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.88■□□□□ 0.45
PRAMEP78395 AL645929.1-201ENST00000420084 975 ntBASIC17.88■□□□□ 0.45
PRAMEP78395 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.88■□□□□ 0.45
PRAMEP78395 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.88■□□□□ 0.45
PRAMEP78395 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms